Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CC99x_008945 | Not Available | Negative | 2116568 - 2118490 | 72272.9 |
| hypothetical protein | CC99x_008950 | Not Available | Negative | 2118747 - 2119763 | 39366.3 |
| class ii aldolase/adducin family protein | CC99x_008955 | Not Available | Positive | 2120249 - 2120977 | 27603.3 |
| duf898 domain-containing protein | CC99x_008960 | Not Available | Positive | 2121076 - 2122332 | 47960.9 |
| m48 family metallopeptidase | CC99x_008965 | Not Available | Positive | 2122332 - 2123405 | 39970.4 |
| peptide deformylase | CC99x_008970 | Not Available | Negative | 2123786 - 2124382 | 22621.8 |
| patatin-like phospholipase family protein | CC99x_008975 | Not Available | Negative | 2124530 - 2125642 | 41543.9 |
| hypothetical protein | CC99x_008980 | Not Available | Positive | 2125835 - 2128021 | 81776.5 |
| sulfate transporter cysz | CC99x_008985 | Not Available | Positive | 2128229 - 2129026 | 30593.3 |
| universal stress protein | CC99x_008990 | Not Available | Positive | 2129048 - 2129749 | 26468.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.