Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metalloprotease pmba | CC99x_008895 | Not Available | Negative | 2101199 - 2102554 | 49491.8 |
| metalloprotease tldd | CC99x_008900 | Not Available | Negative | 2102836 - 2104284 | 51595.4 |
| carbon-nitrogen hydrolase family protein | CC99x_008905 | Not Available | Negative | 2104301 - 2105143 | 31786.7 |
| tigr02099 family protein | CC99x_008910 | Not Available | Negative | 2105147 - 2109004 | 144397.0 |
| ribonuclease g | CC99x_008915 | Not Available | Negative | 2109130 - 2110599 | 55964.3 |
| rod shape-determining protein | CC99x_008920 | Not Available | Negative | 2110941 - 2112008 | 38721.2 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc | CC99x_008925 | Not Available | Positive | 2112256 - 2112552 | 11013.0 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata | CC99x_008930 | Not Available | Positive | 2112636 - 2114090 | 52504.8 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb | CC99x_008935 | Not Available | Positive | 2114106 - 2115542 | 54004.9 |
| hypothetical protein | CC99x_008940 | Not Available | Positive | 2115632 - 2116528 | 35010.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.