Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CC99x_008845 | Not Available | Positive | 2085863 - 2087500 | 63737.6 |
| endonuclease domain-containing protein | CC99x_008850 | Not Available | Negative | 2087845 - 2088228 | 15207.5 |
| endonuclease domain-containing protein | CC99x_008855 | Not Available | Negative | 2088334 - 2088669 | 13202.8 |
| autotransporter domain-containing protein | CC99x_008860 | Not Available | Negative | 2089016 - 2092990 | 136933.0 |
| autotransporter outer membrane beta-barrel domain-containing protein | CC99x_008865 | Not Available | Negative | 2093022 - 2094362 | 49445.5 |
| alpha/beta hydrolase | CC99x_008870 | Not Available | Positive | 2094938 - 2095804 | 32705.5 |
| 8-amino-7-oxononanoate synthase | CC99x_008875 | Not Available | Positive | 2095771 - 2096916 | 42353.2 |
| duf948 domain-containing protein | CC99x_008880 | Not Available | Positive | 2097187 - 2098944 | 63721.1 |
| hypothetical protein | CC99x_008885 | Not Available | Negative | 2098967 - 2100640 | 64279.1 |
| hypothetical protein | CC99x_008890 | Not Available | Positive | 2100895 - 2101113 | 8209.35 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.