Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tandem-95 repeat protein | CC99x_008795 | Not Available | Negative | 2053043 - 2056783 | 131505.0 |
| tandem-95 repeat protein | CC99x_008800 | Not Available | Negative | 2057054 - 2063638 | 226335.0 |
| hypothetical protein | CC99x_008805 | Not Available | Negative | 2063881 - 2077623 | 476553.0 |
| transposase family protein | CC99x_008810 | Not Available | Positive | 2077906 - 2079075 | 45135.7 |
| hypothetical protein | CC99x_008815 | Not Available | Positive | 2079087 - 2079224 | 5080.18 |
| hypothetical protein | CC99x_008820 | Not Available | Negative | 2079409 - 2081382 | 69439.7 |
| c-type cytochrome | CC99x_008825 | Not Available | Positive | 2081654 - 2082664 | 37526.5 |
| ghkl domain-containing protein | CC99x_008830 | Not Available | Positive | 2082664 - 2084472 | 69325.4 |
| yfir family protein | CC99x_008835 | Not Available | Positive | 2084485 - 2085093 | 22569.6 |
| hypothetical protein | CC99x_008840 | Not Available | Negative | 2085628 - 2085774 | 5114.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.