Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein-releasing abc transporter permease subunit | CC99x_008745 | Not Available | Negative | 2038535 - 2039782 | 45461.6 |
| agmatine deiminase family protein | CC99x_008750 | Not Available | Positive | 2039907 - 2040983 | 40821.6 |
| carbon-nitrogen hydrolase | CC99x_008755 | Not Available | Positive | 2040980 - 2041912 | 34997.6 |
| hypothetical protein | CC99x_008760 | Not Available | Positive | 2041909 - 2043021 | 41131.5 |
| transcription-repair coupling factor | CC99x_008765 | Not Available | Positive | 2043042 - 2046488 | 130494.0 |
| peptidoglycan binding protein csiv | CC99x_008770 | Not Available | Positive | 2046504 - 2047280 | 28677.4 |
| leucine-rich repeat domain-containing protein | CC99x_008775 | Not Available | Negative | 2047491 - 2048414 | 35699.7 |
| patatin-like phospholipase family protein | CC99x_008780 | Not Available | Positive | 2048750 - 2050111 | 51493.0 |
| protein kinase | CC99x_008785 | Not Available | Positive | 2050307 - 2051707 | 53703.8 |
| hypothetical protein | CC99x_008790 | Not Available | Negative | 2051912 - 2052919 | 38964.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.