Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase family protein | CC99x_008495 | Not Available | Negative | 1971807 - 1979513 | 292946.0 |
| hypothetical protein | CC99x_008500 | Not Available | Negative | 1980163 - 1981062 | 33483.9 |
| sodium-translocating pyrophosphatase | CC99x_008505 | Not Available | Negative | 1981275 - 1983356 | 71638.8 |
| hypothetical protein | CC99x_008510 | Not Available | Positive | 1983630 - 1983890 | 9599.42 |
| hypothetical protein | CC99x_008515 | Not Available | Positive | 1984317 - 1984517 | 7402.91 |
| histidine ammonia-lyase | CC99x_008520 | Not Available | Negative | 1984544 - 1986082 | 56123.6 |
| urocanate hydratase | CC99x_008525 | Not Available | Negative | 1986115 - 1987785 | 60539.5 |
| imidazolonepropionase | CC99x_008530 | Not Available | Negative | 1987775 - 1989004 | 45467.3 |
| formimidoylglutamase | CC99x_008535 | Not Available | Negative | 1989008 - 1989988 | 36916.9 |
| sel1 repeat family protein | CC99x_008540 | Not Available | Negative | 1990027 - 1990920 | 33700.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.