Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate carbamoyltransferase catalytic subunit | CC99x_000720 | Not Available | Negative | 171193 - 172146 | 35156.8 |
| holliday junction resolvase ruvx | CC99x_000725 | Not Available | Negative | 172152 - 172598 | 16876.1 |
| yqge/algh family protein | CC99x_000730 | Not Available | Negative | 172630 - 173199 | 20960.1 |
| tonb family protein | CC99x_000735 | Not Available | Negative | 173359 - 174120 | 28502.4 |
| chemotaxis protein chew | CC99x_000740 | Not Available | Positive | 174216 - 174845 | 24095.4 |
| methyl-accepting chemotaxis protein | CC99x_000745 | Not Available | Positive | 174851 - 176155 | 48227.9 |
| chemotaxis protein chew | CC99x_000750 | Not Available | Positive | 176159 - 177973 | 68373.4 |
| hypothetical protein | CC99x_000755 | Not Available | Positive | 177970 - 178368 | 15458.2 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | CC99x_000760 | Not Available | Negative | 178437 - 179159 | 27039.6 |
| methylenetetrahydrofolate reductase | CC99x_000765 | Not Available | Negative | 179207 - 180040 | 31300.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.