Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spor domain-containing protein | CC99x_008345 | Not Available | Negative | 1927353 - 1928207 | 30942.8 |
| bifunctional tetrahydrofolate synthase/dihydrofolate synthase | CC99x_008350 | Not Available | Negative | 1928238 - 1929485 | 46691.5 |
| acetyl-coa carboxylase, carboxyltransferase subunit beta | CC99x_008355 | Not Available | Negative | 1929502 - 1930434 | 34359.2 |
| trna pseudouridine(38-40) synthase trua | CC99x_008360 | Not Available | Negative | 1930547 - 1931374 | 30966.9 |
| ankyrin repeat domain-containing protein | CC99x_008365 | Not Available | Negative | 1931623 - 1936107 | 169710.0 |
| hypothetical protein | CC99x_008370 | Not Available | Negative | 1936256 - 1937299 | 40208.2 |
| hypothetical protein | CC99x_008375 | Not Available | Negative | 1937412 - 1939166 | 64733.2 |
| hypothetical protein | CC99x_008380 | Not Available | Negative | 1939300 - 1941939 | 97848.0 |
| aspartate-semialdehyde dehydrogenase | CC99x_008385 | Not Available | Negative | 1941992 - 1943014 | 37366.3 |
| 3-isopropylmalate dehydrogenase | CC99x_008390 | Not Available | Negative | 1943031 - 1944110 | 39437.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.