Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trigger factor | CC99x_008295 | Not Available | Negative | 1918904 - 1920187 | 47880.4 |
| Trna-leu | Not Available | Not Available | Positive | 1920281 - 1920365 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 1920520 - 1920595 | Not Available |
| Trna-his | Not Available | Not Available | Positive | 1920638 - 1920713 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 1920719 - 1920795 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 1920808 - 1920884 | Not Available |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | CC99x_008325 | Not Available | Positive | 1921123 - 1921998 | 31612.6 |
| heavy metal translocating p-type atpase | CC99x_008330 | Not Available | Negative | 1922061 - 1924931 | 106144.0 |
| amidophosphoribosyltransferase | CC99x_008335 | Not Available | Negative | 1925235 - 1926734 | 54880.7 |
| cvpa family protein | CC99x_008340 | Not Available | Negative | 1926814 - 1927344 | 19470.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.