Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | CC99x_008245 | Not Available | Negative | 1904487 - 1907549 | 112699.0 |
| efflux rnd transporter periplasmic adaptor subunit | CC99x_008250 | Not Available | Negative | 1907560 - 1908606 | 38199.5 |
| protein kinase | CC99x_008255 | Not Available | Negative | 1909262 - 1911232 | 74465.7 |
| sura n-terminal domain-containing protein | CC99x_008260 | Not Available | Negative | 1911305 - 1913197 | 71350.6 |
| Trna-asp | Not Available | Not Available | Positive | 1913348 - 1913424 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 1913430 - 1913505 | Not Available |
| hu family dna-binding protein | CC99x_008275 | Not Available | Negative | 1913514 - 1913834 | 11253.4 |
| endopeptidase la | CC99x_008280 | Not Available | Negative | 1913968 - 1916388 | 90127.0 |
| atp-dependent clp protease atp-binding subunit clpx | CC99x_008285 | Not Available | Negative | 1916714 - 1918003 | 47152.5 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | CC99x_008290 | Not Available | Negative | 1918143 - 1918760 | 22615.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.