Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ankyrin repeat domain-containing protein | CC99x_008195 | Not Available | Positive | 1889315 - 1891276 | 72755.9 |
| phosphoenolpyruvate synthase | CC99x_008200 | Not Available | Negative | 1891401 - 1893776 | 87752.6 |
| kinase/pyrophosphorylase | CC99x_008205 | Not Available | Positive | 1893836 - 1894657 | 31269.4 |
| hypothetical protein | CC99x_008210 | Not Available | Positive | 1894788 - 1895003 | 8253.95 |
| bifunctional 2-methylcitrate dehydratase/aconitate hydratase | CC99x_008215 | Not Available | Negative | 1895234 - 1896655 | 53026.7 |
| 2-methylcitrate synthase | CC99x_008220 | Not Available | Negative | 1896692 - 1897837 | 42581.3 |
| methylisocitrate lyase | CC99x_008225 | Not Available | Negative | 1897830 - 1898711 | 32796.1 |
| amino acid permease | CC99x_008230 | Not Available | Negative | 1898806 - 1900197 | 51225.7 |
| hypothetical protein | CC99x_008235 | Not Available | Positive | 1900351 - 1902099 | 65675.5 |
| mbl fold metallo-hydrolase | CC99x_008240 | Not Available | Positive | 1902874 - 1904289 | 53395.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.