Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-serine ammonia-lyase | CC99x_008145 | Not Available | Negative | 1874264 - 1875622 | 49903.0 |
| cation:proton antiporter | CC99x_008150 | Not Available | Negative | 1876256 - 1877425 | 42555.8 |
| tetratricopeptide repeat protein | CC99x_008155 | Not Available | Positive | 1877579 - 1879093 | 57503.6 |
| hypothetical protein | CC99x_008160 | Not Available | Negative | 1879464 - 1879832 | 14592.8 |
| methyltransferase regulatory domain-containing protein | CC99x_008165 | Not Available | Positive | 1880119 - 1881705 | 60771.6 |
| outer membrane beta-barrel protein | CC99x_008170 | Not Available | Positive | 1881882 - 1882649 | 28274.4 |
| hypothetical protein | CC99x_008175 | Not Available | Negative | 1882709 - 1886176 | 130625.0 |
| hypothetical protein | CC99x_008180 | Not Available | Negative | 1886530 - 1887399 | 33435.6 |
| non-heme iron oxygenase ferredoxin subunit | CC99x_008185 | Not Available | Positive | 1887581 - 1887889 | 11230.6 |
| hypothetical protein | CC99x_008190 | Not Available | Negative | 1888060 - 1889076 | 39005.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.