Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CC99x_008095 | Not Available | Negative | 1858978 - 1859559 | 22110.2 |
| translocation/assembly module tamb | CC99x_008100 | Not Available | Positive | 1859872 - 1862196 | 86776.0 |
| rna polymerase sigma factor rpos | CC99x_008105 | Not Available | Negative | 1862335 - 1863399 | 40762.3 |
| marr family winged helix-turn-helix transcriptional regulator | CC99x_008110 | Not Available | Negative | 1863458 - 1863910 | 17127.9 |
| aconitate hydratase acna | CC99x_008115 | Not Available | Positive | 1864179 - 1866896 | 100391.0 |
| class ii fumarate hydratase | CC99x_008120 | Not Available | Positive | 1867110 - 1868501 | 49763.3 |
| eal domain-containing protein | CC99x_008125 | Not Available | Positive | 1868620 - 1870989 | 90149.8 |
| mfs transporter | CC99x_008130 | Not Available | Negative | 1871026 - 1872258 | 44556.8 |
| hypothetical protein | CC99x_008135 | Not Available | Positive | 1872303 - 1873214 | 34074.1 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | CC99x_008140 | Not Available | Positive | 1873253 - 1874035 | 28515.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.