Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| luxr c-terminal-related transcriptional regulator | CC99x_008045 | Not Available | Positive | 1845609 - 1846418 | 31375.7 |
| sam-dependent methyltransferase | CC99x_008050 | Not Available | Positive | 1846659 - 1848227 | 60582.1 |
| abc transporter substrate-binding protein/permease | CC99x_008055 | Not Available | Positive | 1848605 - 1850011 | 51615.0 |
| amino acid abc transporter atp-binding protein | CC99x_008060 | Not Available | Positive | 1850004 - 1850720 | 26516.6 |
| hypothetical protein | CC99x_008065 | Not Available | Negative | 1850715 - 1851062 | 12730.8 |
| aminodeoxychorismate synthase component i | CC99x_008070 | Not Available | Negative | 1851187 - 1852593 | 52732.1 |
| mfs transporter | CC99x_008075 | Not Available | Negative | 1852598 - 1853815 | 44627.8 |
| abc transporter permease subunit | CC99x_008080 | Not Available | Positive | 1853965 - 1855713 | 66289.6 |
| aaa-associated domain-containing protein | CC99x_008085 | Not Available | Positive | 1855858 - 1857168 | 48660.7 |
| bama/tama family outer membrane protein | CC99x_008090 | Not Available | Positive | 1857179 - 1858924 | 66105.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.