Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| grx4 family monothiol glutaredoxin | CC99x_007995 | Not Available | Negative | 1828388 - 1828738 | 13090.0 |
| superoxide dismutase | CC99x_008000 | Not Available | Positive | 1828887 - 1829471 | 22171.0 |
| hypothetical protein | CC99x_008005 | Not Available | Positive | 1830072 - 1834286 | 156247.0 |
| hypothetical protein | CC99x_008010 | Not Available | Positive | 1834587 - 1834793 | 7842.4 |
| alpha/beta fold hydrolase | CC99x_008015 | Not Available | Negative | 1834818 - 1836743 | 73700.8 |
| hypothetical protein | CC99x_008020 | Not Available | Negative | 1836765 - 1837475 | 26502.7 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | CC99x_008025 | Not Available | Negative | 1837488 - 1839779 | 86781.4 |
| tetr/acrr family transcriptional regulator | CC99x_008030 | Not Available | Positive | 1840523 - 1841086 | 20864.9 |
| ribonucleoside-diphosphate reductase subunit alpha | CC99x_008035 | Not Available | Positive | 1841441 - 1844236 | 105874.0 |
| ribonucleotide-diphosphate reductase subunit beta | CC99x_008040 | Not Available | Positive | 1844175 - 1845365 | 45882.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.