Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| radical sam family heme chaperone hemw | CC99x_000670 | Not Available | Negative | 163144 - 164286 | 43549.2 |
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | CC99x_000675 | Not Available | Negative | 164286 - 164912 | 22989.7 |
| alpha/beta hydrolase | CC99x_000680 | Not Available | Negative | 165038 - 165922 | 32649.9 |
| yggu family protein | CC99x_000685 | Not Available | Negative | 165906 - 166178 | 10351.5 |
| yggt family protein | CC99x_000690 | Not Available | Negative | 166320 - 166901 | 21976.2 |
| pyrroline-5-carboxylate reductase | CC99x_000695 | Not Available | Negative | 166918 - 167742 | 29447.7 |
| yggs family pyridoxal phosphate-dependent enzyme | CC99x_000700 | Not Available | Negative | 167772 - 168458 | 25591.1 |
| type iv pilus twitching motility protein pilt | CC99x_000705 | Not Available | Positive | 168480 - 169514 | 38324.4 |
| rhodanese-like domain-containing protein | CC99x_000710 | Not Available | Positive | 169577 - 169870 | 11108.6 |
| amidohydrolase family protein | CC99x_000715 | Not Available | Negative | 169928 - 171196 | 45898.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.