Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dctp deaminase | CC99x_007945 | Not Available | Negative | 1819162 - 1819728 | 21062.2 |
| iron-sulfur cluster carrier protein apbc | CC99x_007950 | Not Available | Negative | 1819742 - 1820839 | 40168.0 |
| methionine--trna ligase | CC99x_007955 | Not Available | Positive | 1820953 - 1822980 | 77081.0 |
| rnfabcdge type electron transport complex subunit b | CC99x_007960 | Not Available | Positive | 1822985 - 1823635 | 24020.1 |
| endonuclease iii | CC99x_007965 | Not Available | Positive | 1823628 - 1824257 | 23171.1 |
| duf1841 family protein | CC99x_007970 | Not Available | Positive | 1824401 - 1824835 | 17114.4 |
| ompa family protein | CC99x_007975 | Not Available | Negative | 1825017 - 1825910 | 33350.8 |
| dihydroorotase | CC99x_007980 | Not Available | Positive | 1825964 - 1826995 | 38321.2 |
| ribonuclease t | CC99x_007985 | Not Available | Positive | 1827005 - 1827607 | 22529.3 |
| peroxiredoxin | CC99x_007990 | Not Available | Negative | 1827627 - 1828232 | 22107.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.