Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase 4 subunit b | CC99x_007895 | Not Available | Negative | 1805998 - 1808016 | 75313.2 |
| higa family addiction module antidote protein | CC99x_007900 | Not Available | Negative | 1808013 - 1808303 | 10788.9 |
| quaternary ammonium compound efflux smr transporter suge | CC99x_007905 | Not Available | Positive | 1808561 - 1808890 | 11640.8 |
| srpbcc family protein | CC99x_007910 | Not Available | Positive | 1809081 - 1809614 | 19754.9 |
| chemotaxis protein cheb | CC99x_007915 | Not Available | Negative | 1809683 - 1810273 | 21265.7 |
| response regulator | CC99x_007920 | Not Available | Negative | 1810284 - 1812239 | 73027.1 |
| protein-glutamate o-methyltransferase cher | CC99x_007925 | Not Available | Negative | 1812264 - 1813097 | 32347.6 |
| response regulator | CC99x_007930 | Not Available | Negative | 1813088 - 1816744 | 137145.0 |
| hypothetical protein | CC99x_007935 | Not Available | Negative | 1816845 - 1818251 | 51996.9 |
| hypothetical protein | CC99x_007940 | Not Available | Negative | 1818423 - 1818611 | 7200.56 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.