Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CC99x_007760 | Not Available | Negative | 1784418 - 1784954 | 21006.2 |
| hypothetical protein | CC99x_007765 | Not Available | Negative | 1784993 - 1785991 | 39357.4 |
| hypothetical protein | CC99x_007770 | Not Available | Negative | 1786129 - 1786344 | 7929.32 |
| duf1778 domain-containing protein | CC99x_007860 | Not Available | Negative | 1797870 - 1798175 | 11677.3 |
| mc/slc25 family protein | CC99x_007865 | Not Available | Negative | 1799328 - 1800158 | 29955.1 |
| hypothetical protein | CC99x_007870 | Not Available | Negative | 1800833 - 1801369 | 19533.1 |
| nadh-quinone oxidoreductase subunit c | CC99x_007875 | Not Available | Negative | 1801379 - 1802926 | 58640.8 |
| hydrogenase 4 subunit f | CC99x_007880 | Not Available | Negative | 1802954 - 1804408 | 53610.5 |
| hypothetical protein | CC99x_007885 | Not Available | Negative | 1804410 - 1805066 | 24540.1 |
| nadh-quinone oxidoreductase subunit h | CC99x_007890 | Not Available | Negative | 1805066 - 1806013 | 35254.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.