Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylformylglycinamidine cyclo-ligase | CC99x_007710 | Not Available | Positive | 1777477 - 1778514 | 37244.8 |
| phosphoribosylglycinamide formyltransferase | CC99x_007715 | Not Available | Positive | 1778507 - 1779187 | 24903.7 |
| duf3108 domain-containing protein | CC99x_007720 | Not Available | Positive | 1779184 - 1779984 | 31196.2 |
| hypothetical protein | CC99x_007725 | Not Available | Positive | 1780047 - 1780328 | 9772.56 |
| Trna-arg | Not Available | Not Available | Positive | 1780377 - 1780453 | Not Available |
| isl3 family transposase | CC99x_007735 | Not Available | Negative | 1780709 - 1781884 | 46784.3 |
| gnat family n-acetyltransferase | CC99x_007740 | Not Available | Negative | 1781937 - 1782425 | 18231.3 |
| duf1778 domain-containing protein | CC99x_007745 | Not Available | Negative | 1782413 - 1782718 | 11677.3 |
| hypothetical protein | CC99x_007750 | Not Available | Negative | 1783431 - 1783838 | 15565.6 |
| transposase | CC99x_007755 | Not Available | Negative | 1784154 - 1784291 | 4926.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.