Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bamd | CC99x_007660 | Not Available | Positive | 1769480 - 1770235 | 28955.7 |
| proline--trna ligase | CC99x_007665 | Not Available | Positive | 1770251 - 1771963 | 64611.8 |
| ompa family protein | CC99x_007670 | Not Available | Negative | 1772091 - 1772666 | 20897.2 |
| acylphosphatase | CC99x_007675 | Not Available | Negative | 1772802 - 1773029 | 8497.92 |
| arsenate reductase (glutaredoxin) | CC99x_007680 | Not Available | Positive | 1773198 - 1773548 | 13354.8 |
| nad(p)h:quinone oxidoreductase | CC99x_007685 | Not Available | Positive | 1773548 - 1774153 | 21473.8 |
| hypothetical protein | CC99x_007690 | Not Available | Positive | 1774397 - 1774807 | 14239.9 |
| hypothetical protein | CC99x_007695 | Not Available | Positive | 1774945 - 1775439 | 18187.6 |
| dnaa regulatory inactivator hda | CC99x_007700 | Not Available | Negative | 1775580 - 1776293 | 27054.2 |
| duf2066 domain-containing protein | CC99x_007705 | Not Available | Negative | 1776281 - 1777369 | 41103.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.