Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine--trna ligase | CC99x_007610 | Not Available | Negative | 1758346 - 1759725 | 52533.3 |
| glutamate--trna ligase | CC99x_007615 | Not Available | Negative | 1759759 - 1761207 | 54509.2 |
| peptidyl-prolyl cis-trans isomerase | CC99x_007620 | Not Available | Positive | 1761297 - 1761800 | 18573.0 |
| udp-2,3-diacylglucosamine diphosphatase | CC99x_007625 | Not Available | Positive | 1761787 - 1762521 | 28076.1 |
| hypothetical protein | CC99x_007630 | Not Available | Negative | 1762532 - 1762954 | 16280.3 |
| ferritin-like domain-containing protein | CC99x_007635 | Not Available | Negative | 1763059 - 1763871 | 31050.1 |
| hypothetical protein | CC99x_007640 | Not Available | Positive | 1764059 - 1764367 | 11922.9 |
| atp-dependent chaperone clpb | CC99x_007645 | Not Available | Negative | 1764418 - 1766982 | 95439.0 |
| peptidoglycan editing factor pgef | CC99x_007650 | Not Available | Negative | 1767263 - 1768015 | 28248.1 |
| 23s rrna pseudouridine(1911/1915/1917) synthase rlud | CC99x_007655 | Not Available | Negative | 1767972 - 1768943 | 35995.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.