Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| valine--trna ligase | CC99x_007510 | Not Available | Positive | 1736211 - 1738994 | 107356.0 |
| type ii toxin-antitoxin system hipa family toxin | CC99x_007515 | Not Available | Negative | 1739180 - 1740484 | 50315.3 |
| helix-turn-helix domain-containing protein | CC99x_007520 | Not Available | Negative | 1740486 - 1740734 | 9167.11 |
| acyl-coa desaturase | CC99x_007525 | Not Available | Negative | 1740868 - 1741743 | 33951.5 |
| alpha/beta hydrolase | CC99x_007530 | Not Available | Positive | 1742188 - 1743126 | 35643.1 |
| vwa domain-containing protein | CC99x_007535 | Not Available | Negative | 1743098 - 1746154 | 111498.0 |
| hypothetical protein | CC99x_007540 | Not Available | Positive | 1746410 - 1746661 | 9589.69 |
| metal-dependent hydrolase | CC99x_007545 | Not Available | Negative | 1746666 - 1747538 | 34066.6 |
| peptide chain release factor 3 | CC99x_007550 | Not Available | Negative | 1747587 - 1749167 | 59538.6 |
| anion permease | CC99x_007555 | Not Available | Positive | 1749402 - 1750844 | 52895.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.