Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CC99x_007460 | Not Available | Negative | 1721733 - 1722752 | 39274.5 |
| protein kinase | CC99x_007465 | Not Available | Negative | 1722839 - 1725946 | 114310.0 |
| protein kinase | CC99x_007470 | Not Available | Negative | 1726114 - 1729263 | 118260.0 |
| hypothetical protein | CC99x_007475 | Not Available | Positive | 1729440 - 1729895 | 17251.5 |
| transposase family protein | CC99x_007480 | Not Available | Positive | 1729855 - 1730598 | 28906.5 |
| hypothetical protein | CC99x_007485 | Not Available | Positive | 1730610 - 1730747 | 5068.11 |
| hypothetical protein | CC99x_007490 | Not Available | Negative | 1731006 - 1732043 | 40139.8 |
| lps export abc transporter permease lptg | CC99x_007495 | Not Available | Negative | 1732140 - 1733213 | 40847.7 |
| lps export abc transporter permease lptf | CC99x_007500 | Not Available | Negative | 1733217 - 1734341 | 42690.6 |
| leucyl aminopeptidase | CC99x_007505 | Not Available | Positive | 1734696 - 1736198 | 54266.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.