Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein translocase subunit secf | CC99x_007410 | Not Available | Negative | 1706531 - 1707460 | 33656.4 |
| protein translocase subunit secd | CC99x_007415 | Not Available | Negative | 1707462 - 1709324 | 67370.6 |
| preprotein translocase subunit yajc | CC99x_007420 | Not Available | Negative | 1709477 - 1709839 | 13051.2 |
| Trna-leu | Not Available | Not Available | Positive | 1710023 - 1710109 | Not Available |
| hypothetical protein | CC99x_007430 | Not Available | Negative | 1710154 - 1715619 | 212511.0 |
| nad-dependent epimerase | CC99x_007435 | Not Available | Negative | 1716153 - 1717166 | 38471.8 |
| nucleotide sugar dehydrogenase | CC99x_007440 | Not Available | Negative | 1717166 - 1718494 | 48876.1 |
| rdd family protein | CC99x_007445 | Not Available | Positive | 1718862 - 1719329 | 18155.5 |
| mfs transporter | CC99x_007450 | Not Available | Negative | 1719354 - 1720556 | 43583.5 |
| lysr family transcriptional regulator | CC99x_007455 | Not Available | Positive | 1720675 - 1721571 | 34442.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.