Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | CC99x_000620 | Not Available | Positive | 150984 - 152888 | 72060.0 |
| fluoride efflux transporter crcb | CC99x_000625 | Not Available | Negative | 152966 - 153343 | 13785.3 |
| mfs transporter | CC99x_000630 | Not Available | Negative | 153492 - 154751 | 46117.9 |
| aaa family atpase | CC99x_000635 | Not Available | Positive | 155076 - 156365 | 49250.4 |
| class i sam-dependent rrna methyltransferase | CC99x_000640 | Not Available | Negative | 156357 - 157529 | 43797.5 |
| atp-binding protein | CC99x_000645 | Not Available | Positive | 157821 - 159119 | 50936.9 |
| hypothetical protein | CC99x_000650 | Not Available | Positive | 159324 - 159641 | 12136.6 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | CC99x_000655 | Not Available | Negative | 159688 - 160485 | 30617.9 |
| slc13 family permease | CC99x_000660 | Not Available | Positive | 160681 - 162522 | 66410.7 |
| hypothetical protein | CC99x_000665 | Not Available | Negative | 162598 - 163128 | 20551.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.