Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster assembly protein iscx | CC99x_007360 | Not Available | Negative | 1699279 - 1699479 | 7980.37 |
| isc system 2fe-2s type ferredoxin | CC99x_007365 | Not Available | Negative | 1699479 - 1699817 | 12640.0 |
| fe-s protein assembly chaperone hsca | CC99x_007370 | Not Available | Negative | 1699810 - 1701648 | 67768.5 |
| fe-s protein assembly co-chaperone hscb | CC99x_007375 | Not Available | Negative | 1701657 - 1702229 | 22667.9 |
| iron-sulfur cluster assembly accessory protein | CC99x_007380 | Not Available | Negative | 1702219 - 1702605 | 14356.1 |
| fe-s cluster assembly scaffold iscu | CC99x_007385 | Not Available | Negative | 1702589 - 1702996 | 14569.3 |
| iscs subfamily cysteine desulfurase | CC99x_007390 | Not Available | Negative | 1703008 - 1704222 | 44553.4 |
| rrf2 family transcriptional regulator | CC99x_007395 | Not Available | Negative | 1704219 - 1704701 | 17895.0 |
| rna methyltransferase | CC99x_007400 | Not Available | Negative | 1704817 - 1705557 | 27527.7 |
| inositol monophosphatase | CC99x_007405 | Not Available | Positive | 1705646 - 1706422 | 28644.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.