Candidatus Berkiella cookevillensis

CoccusMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Candidatus Berkiellales

Family

Candidatus Berkiellaceae

Genus

Candidatus Berkiella

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderCandidatus Berkiellales
FamilyCandidatus Berkiellaceae
GenusCandidatus Berkiella
SpeciesCandidatus Berkiella cookevillensis
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeCoccus
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatbiofilm sample from a cooling tower
Biotic relationshipNot Available
Host(s)Amoeba, Acanthamoeba polyphaga
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Berkiella cookevillensis strain CC99 CC99_02, whole

Gene Summary

Adenine Count

924980 bp

Thymine Count

927602 bp

Guanine Count

565100 bp

Cytosine Count

567154 bp

Genome Length

2984836 bp

Protein-coding Genes

2513 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane protein assembly factor bambCC99x_007310Not AvailableNegative1690863 - 169207144443.1
tetratricopeptide repeat proteinCC99x_007315Not AvailableNegative1692082 - 169276525791.1
histidine--trna ligaseCC99x_007320Not AvailableNegative1692794 - 169406247753.5
duf1937 family proteinCC99x_007325Not AvailableNegative1694299 - 169472116583.1
glycine zipper 2tm domain-containing proteinCC99x_007330Not AvailableNegative1695152 - 169562216290.4
hypothetical proteinCC99x_007335Not AvailablePositive1695769 - 16959155350.87
hypothetical proteinCC99x_007340Not AvailableNegative1695920 - 169649521955.0
type iv pilus biogenesis/stability protein pilwCC99x_007345Not AvailableNegative1696523 - 169731729699.6
23s rrna (adenine(2503)-c(2))-methyltransferase rlmnCC99x_007350Not AvailableNegative1697363 - 169851443740.1
nucleoside-diphosphate kinaseCC99x_007355Not AvailableNegative1698640 - 169907115911.2

Displaying genes 1471 – 1480 of 2571 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.