Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotidyl transferase abieii/abigii toxin family protein | CC99x_007250 | Not Available | Negative | 1684808 - 1685752 | 36916.7 |
| hypothetical protein | CC99x_007255 | Not Available | Negative | 1685749 - 1686369 | 23429.3 |
| hypothetical protein | CC99x_007260 | Not Available | Negative | 1686525 - 1686674 | 5619.68 |
| tyrosine-type recombinase/integrase | CC99x_007265 | Not Available | Negative | 1686692 - 1687069 | 14390.4 |
| transposase | CC99x_007275 | Not Available | Positive | 1687203 - 1687814 | 24543.0 |
| Trna-leu | Not Available | Not Available | Positive | 1688044 - 1688132 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 1688147 - 1688220 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 1688272 - 1688346 | Not Available |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | CC99x_007300 | Not Available | Negative | 1688483 - 1689037 | 20053.3 |
| ribosome biogenesis gtpase der | CC99x_007305 | Not Available | Negative | 1689347 - 1690852 | 56808.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.