Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CC99x_007150 | Not Available | Negative | 1667011 - 1667526 | 18834.0 |
| rimk/lysx family protein | CC99x_007155 | Not Available | Negative | 1667710 - 1668201 | 18189.2 |
| hypothetical protein | CC99x_007160 | Not Available | Positive | 1668465 - 1669715 | 45971.4 |
| nad(p)/fad-dependent oxidoreductase | CC99x_007165 | Not Available | Positive | 1669851 - 1671155 | 48105.4 |
| hypothetical protein | CC99x_007170 | Not Available | Negative | 1671159 - 1672877 | 63515.2 |
| duf488 family protein | CC99x_007175 | Not Available | Negative | 1673110 - 1673481 | 14801.1 |
| rrf2 family transcriptional regulator | CC99x_007180 | Not Available | Negative | 1673518 - 1673925 | 15558.9 |
| no-inducible flavohemoprotein | CC99x_007185 | Not Available | Positive | 1674122 - 1675360 | 46558.7 |
| hypothetical protein | CC99x_007190 | Not Available | Positive | 1675557 - 1676480 | 35167.4 |
| duf1971 domain-containing protein | CC99x_007195 | Not Available | Negative | 1676542 - 1676811 | 10303.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.