Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chorismate lyase | CC99x_007100 | Not Available | Positive | 1656063 - 1656599 | 20267.7 |
| hypothetical protein | CC99x_007105 | Not Available | Negative | 1656831 - 1657229 | 14022.2 |
| rna-binding transcriptional accessory protein | CC99x_007110 | Not Available | Positive | 1657633 - 1659939 | 85506.7 |
| hypothetical protein | CC99x_007115 | Not Available | Negative | 1659986 - 1662364 | 88597.9 |
| multidrug effflux mfs transporter | CC99x_007120 | Not Available | Negative | 1662532 - 1663710 | 42859.9 |
| hypothetical protein | CC99x_007125 | Not Available | Negative | 1663841 - 1664113 | 9701.64 |
| hypothetical protein | CC99x_007130 | Not Available | Negative | 1664277 - 1665020 | 27341.6 |
| hypothetical protein | CC99x_007135 | Not Available | Negative | 1665122 - 1665316 | 7381.03 |
| duf547 domain-containing protein | CC99x_007140 | Not Available | Positive | 1665591 - 1666292 | 27263.6 |
| pyridoxamine 5'-phosphate oxidase | CC99x_007145 | Not Available | Positive | 1666296 - 1666934 | 25059.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.