Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CC99x_007050 | Not Available | Negative | 1639817 - 1640380 | 21440.9 |
| hypothetical protein | CC99x_007055 | Not Available | Positive | 1640597 - 1641313 | 26614.6 |
| duf3638 domain-containing protein | CC99x_007060 | Not Available | Positive | 1641495 - 1651595 | 386389.0 |
| paraquat-inducible protein a | CC99x_007065 | Not Available | Negative | 1651686 - 1652276 | 22000.6 |
| hypothetical protein | CC99x_007070 | Not Available | Negative | 1652513 - 1652869 | 13316.4 |
| hypothetical protein | CC99x_007075 | Not Available | Negative | 1652896 - 1653333 | 16790.7 |
| hypothetical protein | CC99x_007080 | Not Available | Negative | 1653372 - 1653692 | 12098.1 |
| hypothetical protein | CC99x_007085 | Not Available | Negative | 1654272 - 1654760 | 18810.9 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | CC99x_007090 | Not Available | Positive | 1654812 - 1655462 | 23899.0 |
| 2'-5' rna ligase family protein | CC99x_007095 | Not Available | Positive | 1655479 - 1656066 | 22516.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.