Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CC99x_007000 | Not Available | Positive | 1628746 - 1629285 | 20018.0 |
| hsp70 family protein | CC99x_007005 | Not Available | Negative | 1629309 - 1630565 | 46359.0 |
| beta-lactamase family protein | CC99x_007010 | Not Available | Positive | 1630871 - 1632325 | 53885.4 |
| hypothetical protein | CC99x_007015 | Not Available | Negative | 1632381 - 1633979 | 59325.8 |
| nucleoside diphosphate kinase regulator | CC99x_007020 | Not Available | Negative | 1634316 - 1634711 | 14373.4 |
| spermidine/putrescine abc transporter substrate-binding protein | CC99x_007025 | Not Available | Negative | 1635049 - 1636146 | 42207.3 |
| abc transporter permease subunit | CC99x_007030 | Not Available | Negative | 1636071 - 1636841 | 29160.6 |
| abc transporter permease subunit | CC99x_007035 | Not Available | Negative | 1636825 - 1637676 | 31837.3 |
| spermidine/putrescine abc transporter atp-binding protein pota | CC99x_007040 | Not Available | Negative | 1637680 - 1638780 | 41625.5 |
| phna domain-containing protein | CC99x_007045 | Not Available | Positive | 1639093 - 1639434 | 12548.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.