Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar brake protein | CC99x_006885 | Not Available | Positive | 1610012 - 1610791 | 30015.3 |
| Trna-arg | Not Available | Not Available | Positive | 1611073 - 1611148 | Not Available |
| hypothetical protein | CC99x_006900 | Not Available | Negative | 1612164 - 1612430 | 10152.3 |
| tyrosine-type recombinase/integrase | CC99x_006905 | Not Available | Negative | 1612509 - 1613807 | 49009.7 |
| hypothetical protein | CC99x_006910 | Not Available | Negative | 1613863 - 1614552 | 25836.3 |
| hypothetical protein | CC99x_006915 | Not Available | Negative | 1614549 - 1615097 | 19985.8 |
| is30 family transposase | CC99x_006920 | Not Available | Negative | 1615449 - 1616432 | 39393.0 |
| hypothetical protein | CC99x_006930 | Not Available | Negative | 1617500 - 1618525 | 39324.0 |
| heat repeat domain-containing protein | CC99x_006935 | Not Available | Negative | 1618522 - 1619511 | 37200.3 |
| hypothetical protein | CC99x_006940 | Not Available | Negative | 1619555 - 1619737 | 6818.14 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.