Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | CC99x_000570 | Not Available | Negative | 134943 - 135866 | 34616.0 |
| response regulator | CC99x_000575 | Not Available | Negative | 136129 - 138531 | 90823.6 |
| eal domain-containing response regulator | CC99x_000580 | Not Available | Negative | 139140 - 140309 | 43900.1 |
| amino acid permease | CC99x_000585 | Not Available | Positive | 141613 - 142932 | 47951.8 |
| acyl-coa dehydrogenase family protein | CC99x_000590 | Not Available | Positive | 143044 - 145119 | 78512.8 |
| dead/deah box helicase | CC99x_000595 | Not Available | Positive | 145377 - 147170 | 67058.1 |
| duf2062 domain-containing protein | CC99x_000600 | Not Available | Negative | 147391 - 147891 | 18984.1 |
| 30s ribosomal protein s6--l-glutamate ligase | CC99x_000605 | Not Available | Negative | 148173 - 149087 | 32834.9 |
| hypothetical protein | CC99x_000610 | Not Available | Negative | 149310 - 150203 | 32731.3 |
| rna-binding protein | CC99x_000615 | Not Available | Negative | 150374 - 150676 | 10941.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.