Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54 dependent transcriptional regulator | CC99x_006785 | Not Available | Negative | 1589910 - 1590953 | 39074.5 |
| hypothetical protein | CC99x_006790 | Not Available | Negative | 1591297 - 1591593 | 11439.8 |
| flagellar export chaperone flis | CC99x_006795 | Not Available | Negative | 1591686 - 1592069 | 14301.1 |
| flagellar filament capping protein flid | CC99x_006800 | Not Available | Negative | 1592086 - 1593486 | 49282.0 |
| hypothetical protein | CC99x_006805 | Not Available | Negative | 1593517 - 1593846 | 12524.9 |
| flagellin | CC99x_006810 | Not Available | Negative | 1593901 - 1596162 | 75261.8 |
| flagellar hook-associated protein flgl | CC99x_006815 | Not Available | Negative | 1596391 - 1598196 | 63806.5 |
| flagellar hook-associated protein flgk | CC99x_006820 | Not Available | Negative | 1598197 - 1600857 | 92721.4 |
| rod-binding protein | CC99x_006825 | Not Available | Negative | 1600865 - 1601185 | 12217.5 |
| flagellar basal body p-ring protein flgi | CC99x_006830 | Not Available | Negative | 1601197 - 1602285 | 37572.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.