Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar hook-length control protein flik | CC99x_006735 | Not Available | Negative | 1579989 - 1581335 | 48757.0 |
| stas domain-containing protein | CC99x_006740 | Not Available | Negative | 1581462 - 1581767 | 11451.8 |
| flagellar export protein flij | CC99x_006745 | Not Available | Negative | 1581779 - 1582219 | 17324.8 |
| flii/yscn family atpase | CC99x_006750 | Not Available | Negative | 1582231 - 1583553 | 48717.2 |
| hypothetical protein | CC99x_006755 | Not Available | Negative | 1583546 - 1584151 | 23017.6 |
| flagellar motor switch protein flig | CC99x_006760 | Not Available | Negative | 1584151 - 1585155 | 37162.8 |
| flagellar m-ring protein flif | CC99x_006765 | Not Available | Negative | 1585148 - 1586755 | 58425.3 |
| flagellar hook-basal body complex protein flie | CC99x_006770 | Not Available | Negative | 1586769 - 1587089 | 11786.1 |
| sigma-54 dependent transcriptional regulator | CC99x_006775 | Not Available | Negative | 1587076 - 1588413 | 49796.6 |
| hamp domain-containing histidine kinase | CC99x_006780 | Not Available | Negative | 1588410 - 1589417 | 37105.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.