Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c maturation protein ccme | CC99x_006635 | Not Available | Negative | 1563481 - 1563915 | 16037.6 |
| heme exporter protein ccmd | CC99x_006640 | Not Available | Negative | 1563905 - 1564063 | 6019.49 |
| heme abc transporter permease ccmc | CC99x_006645 | Not Available | Negative | 1564057 - 1564797 | 27675.7 |
| heme exporter protein ccmb | CC99x_006650 | Not Available | Negative | 1564809 - 1565480 | 24743.8 |
| heme abc exporter atp-binding protein ccma | CC99x_006655 | Not Available | Negative | 1565473 - 1566156 | 25862.4 |
| protease sohb | CC99x_006660 | Not Available | Positive | 1566427 - 1567455 | 38939.0 |
| duf2802 domain-containing protein | CC99x_006665 | Not Available | Negative | 1567904 - 1568332 | 15963.4 |
| ompa family protein | CC99x_006670 | Not Available | Negative | 1568337 - 1569269 | 34697.8 |
| flagellar motor protein | CC99x_006675 | Not Available | Negative | 1569256 - 1570017 | 27717.3 |
| rna polymerase sigma factor flia | CC99x_006680 | Not Available | Negative | 1570040 - 1570762 | 27026.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.