Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CC99x_006535 | Not Available | Negative | 1539227 - 1540297 | 38913.6 |
| fad-binding protein | CC99x_006540 | Not Available | Negative | 1540307 - 1542457 | 81823.3 |
| hypothetical protein | CC99x_006545 | Not Available | Negative | 1542678 - 1543169 | 17333.0 |
| hypothetical protein | CC99x_006550 | Not Available | Negative | 1543306 - 1543506 | 6921.87 |
| thiamine diphosphokinase | CC99x_006555 | Not Available | Positive | 1543587 - 1544327 | 27853.4 |
| hypothetical protein | CC99x_006560 | Not Available | Positive | 1544477 - 1545037 | 21252.9 |
| ankyrin repeat domain-containing protein | CC99x_006565 | Not Available | Positive | 1545048 - 1546448 | 53368.6 |
| hypothetical protein | CC99x_006570 | Not Available | Positive | 1546449 - 1547126 | 25944.0 |
| site-2 protease family protein | CC99x_006575 | Not Available | Positive | 1547151 - 1547807 | 24234.0 |
| uracil-xanthine permease family protein | CC99x_006580 | Not Available | Positive | 1548073 - 1549338 | 44438.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.