Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CC99x_006435 | Not Available | Positive | 1515531 - 1515944 | 15442.0 |
| hypothetical protein | CC99x_006440 | Not Available | Positive | 1516289 - 1516627 | 13027.6 |
| ankyrin repeat domain-containing protein | CC99x_006445 | Not Available | Positive | 1516861 - 1518807 | 73036.5 |
| hypothetical protein | CC99x_006450 | Not Available | Positive | 1519152 - 1519490 | 12895.5 |
| ankyrin repeat domain-containing protein | CC99x_006455 | Not Available | Positive | 1519723 - 1521399 | 63242.1 |
| hypothetical protein | CC99x_006460 | Not Available | Positive | 1521672 - 1523615 | 73432.8 |
| sigma-70 family rna polymerase sigma factor | CC99x_006465 | Not Available | Positive | 1523882 - 1524853 | 37228.3 |
| dna recombination protein rmuc | CC99x_006470 | Not Available | Positive | 1525217 - 1526254 | 39605.5 |
| hypothetical protein | CC99x_006475 | Not Available | Positive | 1526283 - 1526981 | 26745.0 |
| dmt family transporter | CC99x_006480 | Not Available | Negative | 1526991 - 1527911 | 33777.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.