Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sel1-like repeat protein | CC99x_006385 | Not Available | Positive | 1502047 - 1503624 | 59833.6 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | CC99x_006390 | Not Available | Negative | 1503884 - 1505143 | 45442.8 |
| hypothetical protein | CC99x_006395 | Not Available | Negative | 1505324 - 1505941 | 22841.8 |
| ankyrin repeat domain-containing protein | CC99x_006400 | Not Available | Negative | 1506022 - 1508124 | 78594.0 |
| amino acid abc transporter atp-binding protein | CC99x_006405 | Not Available | Negative | 1508395 - 1509135 | 27952.4 |
| amino acid abc transporter permease | CC99x_006410 | Not Available | Negative | 1509141 - 1510196 | 39433.1 |
| abc transporter permease subunit | CC99x_006415 | Not Available | Negative | 1510181 - 1511305 | 41717.4 |
| amino acid abc transporter substrate-binding protein | CC99x_006420 | Not Available | Negative | 1511312 - 1512448 | 42228.9 |
| hypothetical protein | CC99x_006425 | Not Available | Positive | 1512607 - 1512768 | 6114.36 |
| ankyrin repeat domain-containing protein | CC99x_006430 | Not Available | Positive | 1513061 - 1515313 | 84246.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.