Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CC99x_000520 | Not Available | Positive | 123652 - 124782 | 42727.1 |
| hypothetical protein | CC99x_000525 | Not Available | Positive | 124776 - 125510 | 27246.3 |
| hypothetical protein | CC99x_000530 | Not Available | Negative | 125519 - 127609 | 77846.5 |
| cytochrome p450 | CC99x_000535 | Not Available | Negative | 127811 - 129487 | 64819.1 |
| m48 family metalloprotease | CC99x_000540 | Not Available | Negative | 129661 - 130299 | 23709.5 |
| hypothetical protein | CC99x_000545 | Not Available | Negative | 130327 - 130653 | 11864.1 |
| hypothetical protein | CC99x_000550 | Not Available | Negative | 130876 - 131898 | 37971.4 |
| asparaginase | CC99x_000555 | Not Available | Negative | 132038 - 133024 | 36471.4 |
| giy-yig nuclease family protein | CC99x_000560 | Not Available | Positive | 133218 - 133523 | 11666.4 |
| hypothetical protein | CC99x_000565 | Not Available | Positive | 133617 - 134759 | 44079.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.