Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CC99x_006335 | Not Available | Negative | 1490136 - 1490918 | 29927.5 |
| l,d-transpeptidase | CC99x_006340 | Not Available | Positive | 1491158 - 1491835 | 24864.1 |
| hypothetical protein | CC99x_006345 | Not Available | Positive | 1492008 - 1492226 | 8084.66 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | CC99x_006350 | Not Available | Positive | 1492219 - 1493004 | 28960.8 |
| phosphoglycerate mutase family protein | CC99x_006355 | Not Available | Positive | 1493001 - 1493657 | 24857.3 |
| hypothetical protein | CC99x_006360 | Not Available | Negative | 1493705 - 1497886 | 156941.0 |
| ankyrin repeat domain-containing protein | CC99x_006365 | Not Available | Positive | 1498127 - 1498984 | 31952.8 |
| hypothetical protein | CC99x_006370 | Not Available | Negative | 1499102 - 1499410 | 11828.8 |
| hypothetical protein | CC99x_006375 | Not Available | Negative | 1499438 - 1499716 | 10365.3 |
| sel1-like repeat protein | CC99x_006380 | Not Available | Negative | 1499992 - 1501938 | 72262.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.