Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bama/tama family outer membrane protein | CC99x_006285 | Not Available | Negative | 1475666 - 1477372 | 65446.0 |
| trypsin-like peptidase domain-containing protein | CC99x_006290 | Not Available | Negative | 1477602 - 1479170 | 58107.1 |
| glutamate--cysteine ligase | CC99x_006295 | Not Available | Positive | 1479610 - 1480899 | 48940.1 |
| glutathione synthase | CC99x_006300 | Not Available | Positive | 1480899 - 1481843 | 35907.5 |
| nadph-dependent 2,4-dienoyl-coa reductase | CC99x_006305 | Not Available | Negative | 1482205 - 1484217 | 74090.6 |
| hypothetical protein | CC99x_006310 | Not Available | Positive | 1484480 - 1485061 | 22071.4 |
| duf2157 domain-containing protein | CC99x_006315 | Not Available | Positive | 1485061 - 1485990 | 34602.0 |
| lema family protein | CC99x_006320 | Not Available | Positive | 1486106 - 1486705 | 22431.1 |
| m48 family metallopeptidase | CC99x_006325 | Not Available | Positive | 1486720 - 1488672 | 72915.5 |
| fad/nad(p)-binding protein | CC99x_006330 | Not Available | Positive | 1488682 - 1490055 | 51397.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.