Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ankyrin repeat domain-containing protein | CC99x_006235 | Not Available | Negative | 1461062 - 1462105 | 38923.1 |
| ankyrin repeat domain-containing protein | CC99x_006240 | Not Available | Negative | 1462323 - 1464242 | 72449.6 |
| ankyrin repeat domain-containing protein | CC99x_006245 | Not Available | Negative | 1464519 - 1464785 | 10200.0 |
| ankyrin repeat domain-containing protein | CC99x_006250 | Not Available | Negative | 1465201 - 1466562 | 50329.0 |
| ankyrin repeat domain-containing protein | CC99x_006255 | Not Available | Negative | 1466808 - 1468793 | 74961.0 |
| hypothetical protein | CC99x_006260 | Not Available | Negative | 1468983 - 1469405 | 15970.9 |
| hypothetical protein | CC99x_006265 | Not Available | Negative | 1469707 - 1470006 | 11185.7 |
| retroviral-like aspartic protease family protein | CC99x_006270 | Not Available | Positive | 1470179 - 1471159 | 36968.3 |
| hypothetical protein | CC99x_006275 | Not Available | Negative | 1471564 - 1471929 | 13978.8 |
| translocation/assembly module tamb | CC99x_006280 | Not Available | Negative | 1472096 - 1475653 | 131830.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.