Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | CC99x_006185 | Not Available | Positive | 1450375 - 1450677 | 11199.9 |
| hypothetical protein | CC99x_006190 | Not Available | Negative | 1450747 - 1451820 | 41074.3 |
| hypothetical protein | CC99x_006195 | Not Available | Positive | 1452165 - 1452620 | 17304.7 |
| hypothetical protein | CC99x_006200 | Not Available | Negative | 1452691 - 1454391 | 64821.5 |
| hypothetical protein | CC99x_006205 | Not Available | Negative | 1454648 - 1454869 | 7789.33 |
| duf2520 domain-containing protein | CC99x_006210 | Not Available | Positive | 1455104 - 1455841 | 28053.7 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | CC99x_006215 | Not Available | Positive | 1455838 - 1456623 | 28316.6 |
| pantoate--beta-alanine ligase | CC99x_006220 | Not Available | Positive | 1456649 - 1457449 | 30428.5 |
| type iii pantothenate kinase | CC99x_006225 | Not Available | Positive | 1457558 - 1458325 | 27923.8 |
| ankyrin repeat domain-containing protein | CC99x_006230 | Not Available | Negative | 1458471 - 1460978 | 96419.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.