Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | CC99x_006135 | Not Available | Negative | 1438057 - 1439850 | 66209.3 |
| hypothetical protein | CC99x_006140 | Not Available | Positive | 1440372 - 1441754 | 52771.5 |
| hypothetical protein | CC99x_006145 | Not Available | Positive | 1441799 - 1442797 | 38815.4 |
| hypothetical protein | CC99x_006150 | Not Available | Positive | 1442878 - 1443177 | 10130.0 |
| nuclear transport factor 2 family protein | CC99x_006155 | Not Available | Positive | 1444266 - 1444850 | 22148.1 |
| hypothetical protein | CC99x_006160 | Not Available | Negative | 1444970 - 1446349 | 52196.0 |
| hypothetical protein | CC99x_006165 | Not Available | Positive | 1446568 - 1448844 | 86178.6 |
| manganese efflux pump mntp family protein | CC99x_006170 | Not Available | Negative | 1448888 - 1449454 | 19942.2 |
| tfox/sxy family protein | CC99x_006175 | Not Available | Positive | 1449622 - 1449978 | 13304.1 |
| hypothetical protein | CC99x_006180 | Not Available | Negative | 1449986 - 1450174 | 6993.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.