Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf393 domain-containing protein | CC99x_006085 | Not Available | Negative | 1427719 - 1428117 | 15014.5 |
| hypothetical protein | CC99x_006090 | Not Available | Negative | 1428150 - 1428926 | 29763.2 |
| mfs transporter | CC99x_006095 | Not Available | Positive | 1429103 - 1430728 | 59757.9 |
| helix-turn-helix domain-containing protein | CC99x_006100 | Not Available | Positive | 1430864 - 1431184 | 11858.4 |
| type ii toxin-antitoxin system hipa family toxin | CC99x_006105 | Not Available | Positive | 1431217 - 1432419 | 45841.9 |
| hypothetical protein | CC99x_006110 | Not Available | Negative | 1432431 - 1432865 | 16226.2 |
| hypothetical protein | CC99x_006115 | Not Available | Positive | 1433096 - 1434718 | 61394.6 |
| protein kinase | CC99x_006120 | Not Available | Negative | 1434721 - 1436250 | 57784.9 |
| hypothetical protein | CC99x_006125 | Not Available | Positive | 1436482 - 1437507 | 39002.3 |
| hypothetical protein | CC99x_006130 | Not Available | Positive | 1437732 - 1437977 | 9515.53 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.