Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione transferase gsta | CC99x_005935 | Not Available | Positive | 1388289 - 1388900 | 23311.3 |
| hypothetical protein | CC99x_005940 | Not Available | Negative | 1389514 - 1393344 | 148079.0 |
| dead/deah box helicase | CC99x_005945 | Not Available | Negative | 1393489 - 1395330 | 68516.2 |
| nad(p)/fad-dependent oxidoreductase | CC99x_005950 | Not Available | Positive | 1395644 - 1396831 | 43527.5 |
| hypothetical protein | CC99x_005955 | Not Available | Negative | 1396846 - 1398081 | 45286.9 |
| hypothetical protein | CC99x_005960 | Not Available | Positive | 1398334 - 1399389 | 38714.2 |
| yaii/yqxd family protein | CC99x_005965 | Not Available | Positive | 1399496 - 1399951 | 16688.4 |
| eal domain-containing protein | CC99x_005970 | Not Available | Positive | 1400156 - 1401841 | 64037.5 |
| urea abc transporter substrate-binding protein | CC99x_005975 | Not Available | Positive | 1401850 - 1403130 | 48386.6 |
| hypothetical protein | CC99x_005980 | Not Available | Negative | 1403135 - 1405474 | 84987.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.