Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| periplasmic heavy metal sensor | CC99x_005885 | Not Available | Negative | 1377738 - 1378184 | 17169.2 |
| hypothetical protein | CC99x_005890 | Not Available | Negative | 1378181 - 1378615 | 16372.5 |
| rna polymerase sigma factor | CC99x_005895 | Not Available | Negative | 1378612 - 1379157 | 21583.7 |
| hypothetical protein | CC99x_005900 | Not Available | Negative | 1379180 - 1379539 | 13874.9 |
| hypothetical protein | CC99x_005905 | Not Available | Negative | 1379841 - 1381217 | 52572.3 |
| hypothetical protein | CC99x_005910 | Not Available | Positive | 1381563 - 1382378 | 31086.4 |
| amp-binding protein | CC99x_005915 | Not Available | Positive | 1382463 - 1385270 | 105034.0 |
| hypothetical protein | CC99x_005920 | Not Available | Positive | 1385300 - 1385533 | 8253.06 |
| dsba family protein | CC99x_005925 | Not Available | Negative | 1385612 - 1386331 | 27244.4 |
| mate family efflux transporter | CC99x_005930 | Not Available | Negative | 1386387 - 1387781 | 52174.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.